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Subunidad de Bioinformática y Gestión de Datos
Esta subunidad (Bioinformática y Gestión de Datos (BIOGEDA), Bioinformatics and Data Management (BIODAMA)), integrada en la Unidad de Epidemiología del Cáncer y Ambiental, tiene como principales líneas de investigación:
- Diseño y desarrollo de instrumentos para la obtención de información y transmisión de la misma en la investigación epidemiológica.
- Integración de fuentes de información y datos epidemiológicos
- Bioinformática en el contexto de la epidemiología molecular/genética.
- Infraestructuras de computación, almacenaje y transferencia de datos en salud.
Publicaciones destacadas
Total Effective Xenoestrogen Burden in Serum Samples and Risk for Breast Cancer in a Population-Based Multicase-Control Study in Spain
Pastor-Barriuso R, Fernández MF, Castaño-Vinyals G, Whelan D, Pérez-Gómez B, Llorca J, Villanueva CM, Guevara M, Molina-Molina JM, Artacho-Cordón F, Barriuso-Lapresa L, Tusquets I, Dierssen-Sotos T, Aragonés N, Olea N, Kogevinas M, Pollán M. Total Effective Xenoestrogen Burden in Serum Samples and Risk for Breast Cancer in a Population-Based Multicase-Control Study in Spain. Environ Health Perspect. 2016 Oct;124(10):1575-1582. Epub 2016 May 20.
PUBMEDPastor-Barriuso R, Ascunce N, Ederra M, Erdozáin N, Murillo A, Alés-Martínez JE, Pollán M. Recalibration of the Gail model for predicting invasive breast cancer risk in Spanish women: a population-based cohort study
Pastor-Barriuso R, Ascunce N, Ederra M, Erdozáin N, Murillo A, Alés-Martínez JE, Pollán M. Recalibration of the Gail model for predicting invasive breast cancer risk in Spanish women: a population-based cohort study. Breast Cancer Res Treat. 2013 Feb;138(1):249-59. doi: 10.1007/s10549-013-2428-y.
PUBMEDAir quality modeling and mortality impact of fine particles reduction policies in Spain
Boldo E, Linares C, Aragonés N, Lumbreras J, Borge R, de la Paz D, Pérez-Gómez B, Fernández-Navarro P, García-Pérez J, Pollán M, Ramis R, Moreno T, Karanasiou A, López-Abente G. Air quality modeling and mortality impact of fine particles reduction policies in Spain. Environ Res. 2014 Jan;128:15-26. doi: 10.1016/j.envres.2013.10.009. Epub 2013 Dec 22.
PUBMEDChildhood leukemia and residential proximity to industrial and urban sites
García-Pérez J, López-Abente G, Gómez-Barroso D, Morales-Piga A, Romaguera EP, Tamayo I, Fernández-Navarro P, Ramis R. Childhood leukemia and residential proximity to industrial and urban sites. Environ Res. 2015 Jul;140:542-53. doi: 10.1016/j.envres.2015.05.014. Epub 2015 May 27.
PUBMEDMediterranean Dietary Pattern is Associated with Low Risk of Aggressive Prostate Cancer: MCC-Spain Study
Castelló A, Boldo E, Amiano P, Castaño-Vinyals G, Aragonés N, Gómez-Acebo I, Peiró R, Jimenez-Moleón JJ, Alguacil J, Tardón A, Cecchini L, Lope V, Dierssen-Sotos T, Mengual L, Kogevinas M, Pollán M, Pérez-Gómez B; MCC-Spain Researchers.Mediterranean Dietary Pattern is Associated with Low Risk of Aggressive Prostate Cancer: MCC-Spain Study. J Urol. 2018 Feb;199(2):430-437. doi: 10.1016/j.juro.2017.08.087.
PUBMEDGenome wide association study identifies a novel putative mammographic density locus at 1q12-q21
Fernandez-Navarro P, González-Neira A, Pita G, Díaz-Uriarte R, Tais Moreno L, Ederra M, Pedraz-Pingarrón C, Sánchez-Contador C, Vázquez-Carrete JA, Moreo P, Vidal C, Salas-Trejo D, Stone J, Southey MC, Hopper JL, Pérez-Gómez B, Benitez J, Pollan M. Genome wide association study identifies a novel putative mammographic density locus at 1q12-q21. Int J Cancer. 2015 May 15;136(10):2427-36. doi: 10.1002/ijc.29299.
PUBMEDObstetric history and mammographic density: a population-based cross-sectional study in Spain (DDM-Spain)
Lope V, Pérez-Gómez B, Sánchez-Contador C, Santamariña MC, Moreo P, Vidal C, Laso MS, Ederra M, Pedraz-Pingarrón C, González-Román I, García-López M, Salas-Trejo D, Peris M, Moreno MP, Vázquez-Carrete JA, Collado F, Aragonés N, Pollán M; DDM-Spain. Obstetric history and mammographic density: a population-based cross-sectional study in Spain (DDM-Spain). Breast Cancer Res Treat. 2012 Apr;132(3):1137-46. doi: 10.1007/s10549-011-1936-x.
PUBMEDArsenic and chromium topsoil levels and cancer mortality in Spain
Núñez O, Fernández-Navarro P, Martín-Méndez I, Bel-Lan A, Locutura JF, López-Abente G.Arsenic and chromium topsoil levels and cancer mortality in Spain. Environ Sci Pollut Res Int. 2016 Sep;23(17):17664-75. doi: 10.1007/s11356-016-6806-y.
PUBMEDHelicobacter pylori serological biomarkers of gastric cancer risk in the MCC-Spain case-control Study
Fernández de Larrea-Baz N, Pérez-Gómez B, Michel A, Romero B, Lope V, Pawlita M, Fernández-Villa T, Moreno V, Martín V, Willhauck-Fleckenstein M, López-Abente G, Castilla J, Fernández-Tardón G, Dierssen-Sotos T, Santibáñez M, Peiró R, Jiménez-Moleón JJ, Navarro C, Castaño-Vinyals G, Kogevinas M, Pollán M, de Sanjosé S, Del Campo R, Waterboer T, Aragonés N. Helicobacter pylori serological biomarkers of gastric cancer risk in the MCC-Spain case-control Study. Cancer Epidemiol. 2017 Oct;50(Pt A):76-84. doi: 10.1016/j.canep.2017.08.002. Epub 2017 Sep 7.
PUBMEDEnvironmental metals and cardiovascular disease
Tellez-Plaza M 1, Guallar E 2, Navas-Acien A 3. Environmental metals and cardiovascular disease. BMJ. 2018 Aug 29;362:k3435. doi: 10.1136/bmj.k3435. PubMed PMID: 30158104; PubMed Central PMCID: PMC6283369
PUBMEDModerate alcohol drinking is not associated with risk of depression in older adult
García-Esquinas E, Ortolá R, Gálan I, Soler-Vila H, Laclaustra M, Rodríguez-Artalejo F. Moderate alcohol drinking is not associated with risk of depression in older adults. Sci Rep. 2018 Jul 31;8(1):11512. doi: 10.1038/s41598-018-29985-4. PubMed PMID: 30065286; PubMed Central PMCID: PMC6068095.
PUBMEDUrinary metals and metal mixtures and oxidative stress biomarkers in an adult population from Spain: The Hortega Study
Domingo-Relloso A, Grau-Perez M, Galan-Chilet I, Garrido-Martinez MJ, Tormos C, Navas-Acien A, Gomez-Ariza JL, Monzo-Beltran L, Saez-Tormo G, Garcia-Barrera T, Dueñas Laita A, Briongos Figuero LS, Martin-Escudero JC, Chaves FJ, Redon J, Tellez-Plaza M. Urinary metals and metal mixtures and oxidative stress biomarkers in an adult population from Spain: The Hortega Study. Environ Int. 2019 Feb;123:171-180. doi: 10.1016/j.envint.2018.11.055. Epub 2018 Dec 5. PubMed PMID: 30529889.
PUBMEDSmoke-Free Legislation in Spain and Prematurity
Simón L, Pastor-Barriuso R, Boldo E, Fernández-Cuenca R, Ortiz C, Linares C, Medrano MJ, Galán I. Smoke-Free Legislation in Spain and Prematurity. Pediatrics. 2017 Jun;139(6). pii: e20162068. doi: 10.1542/peds.2016-2068. Epub 2017 May 17. PubMed PMID: 28562257.
PUBMEDImpact of declining exposure to secondhand tobacco smoke in public places to decreasing smoking-related cancer mortality in the US population
García-Esquinas E, Jiménez A, Pastor-Barriuso R, Jones MR, Perez-Gomez B, Navas-Acien A, Tellez-Plaza M. Impact of declining exposure to secondhand tobacco smoke in public places to decreasing smoking-related cancer mortality in the US population. Environ Int. 2018 Aug;117:260-267. doi: 10.1016/j.envint.2018.05.008. Epub 2018 May 16. PubMed PMID: 29775915; PubMed Central PMCID: PMC6136453.
PUBMEDIndividual factors and school-based policies related to adherence to physical activity recommendations in Spanish adolescents
Galán I, Boix R, Medrano MJ, Ramos P, Rivera F, Moreno C. Individual factors and school-based policies related to adherence to physical activity recommendations in Spanish adolescents. Prev Sci. 2014 Aug;15(4):588-99. doi: 10.1007/s11121-013-0407-5. PubMed PMID: 23728581.
PUBMEDArsenic exposure, diabetes-related genes and diabetes prevalence in a general population from Spain
Grau-Perez M, Navas-Acien A, Galan-Chilet I, Briongos-Figuero LS, Morchon-Simon D, Bermudez JD, Crainiceanu CM, de Marco G, Rentero-Garrido P, Garcia-Barrera T, Gomez-Ariza JL, Casasnovas JA, Martin-Escudero JC, Redon J, Chaves FJ, Tellez-Plaza M. Arsenic exposure, diabetes-related genes and diabetes prevalence in a general population from Spain. Environ Pollut. 2018 Apr;235:948-955. doi: 10.1016/j.envpol.2018.01.008. Epub 2018 Feb 21. PubMed PMID: 29751399.
PUBMEDValidity of self-reported exposure to second-hand smoke in hospitality venues
Galán I, Mayo E, López MJ, Pérez-Ríos M, Fu M, Martínez-Sánchez JM, Schiaffino A, Moncada A, Montes A, Nebot M, Fernández E. Validity of self-reported exposure to second-hand smoke in hospitality venues. Environ Res. 2014 Aug;133:1-3. doi: 10.1016/j.envres.2014.04.029. Epub 2014 Jun 3. PubMed PMID: 24906061.
PUBMEDIn silico epigenetics of metal exposure and subclinical atherosclerosis in middle aged men: pilot results from the Aragon Workers Health Study
Riffo-Campos AL, Fuentes-Trillo A, Tang WY, Soriano Z, De Marco G, Rentero-Garrido P, Adam-Felici V, Lendinez-Tortajada V, Francesconi K, Goessler W, Ladd-Acosta C, Leon-Latre M, Casasnovas JA, Chaves FJ, Navas-Acien A, Guallar E, Tellez-Plaza M. In silico epigenetics of metal exposure and subclinical atherosclerosis in middle aged men: pilot results from the Aragon Workers Health Study. Philos Trans R Soc Lond B Biol Sci. 2018 Jun 5;373(1748). pii: 20170084. doi: 10.1098/rstb.2017.0084. PubMed PMID: 29685964; PubMed Central PMCID: PMC5915723.
PUBMEDAlcohol drinking patterns and biomarkers of coronary risk in the Spanish population
Galán I, Valencia-Martín JL, Guallar-Castillón P, Rodríguez-Artalejo F. Alcohol drinking patterns and biomarkers of coronary risk in the Spanish population. Nutr Metab Cardiovasc Dis. 2014 Feb;24(2):189-97. doi: 10.1016/j.numecd.2013.07.002. Epub 2014 Jan 10. PubMed PMID: 24418385.
PUBMEDHepatitis A outbreak disproportionately affecting men who have sex with men (MSM) in the European Union and European Economic Area
Ndumbi P, Freidl GS, Williams CJ, Mårdh O, Varela C, Avellón A, Friesema I, Vennema H, et al. Hepatitis A outbreak disproportionately affecting men who have sex with men (MSM) in the European Union and European Economic Area, June 2016 to May 2017. Euro Surveill. 2018;23(33):pii=1700641.
PUBMEDInformación adicional
Los objetivos principales de esta subunidad son:
- Prestar apoyo en diseño y gestión de bases de datos y aplicaciones para dispositivos móviles/aplicaciones web
- Mantener los servidores de información de enfermedades crónicas y de mortalidad con los que cuenta el CNE (Servidor de Información Epidemiológica on-line “ARIADNA” (https://ariadna.isciii.es/), Servidor de Información Epidemiológica on-line “RAZIEL” (https://raziel.isciii.es/).
- Dar soporte técnico y logístico a la investigación en enfermedades crónicas desde un punto de vista genético y bioinformático (Gestión y desarrollo de aplicaciones de anotación para marcadores genéticos (SNPs, MicroRNA, etc) y extracción de información de estos, Tools de recodificación de identificadores de marcadores y cruces de bases de datos genómicas y representación de datos genómicos).
- Investigar y desarrollar métodos relacionados con instrumentos para la obtención de información y transmisión de esta en la investigación epidemiológica, la integración de fuentes de información y datos epidemiológicos y las infraestructuras de computación, almacenaje y transferencia de datos en salud.
Contacto
Tel.: +34 91 822 26 44
Email: pfernandezn@isciii.es